H. B., Fry, B., Schaffner, S. F., de Bakker, P. I., Varilly, P.,
et al., «Searching for Signals of Evolutionary Selection in 168 Genes Related to Immune Function»,
Hum. Genet., 119, 1–2 (2006), p. 92–102.
Wang, X., Grus, W. E., Zhang, J., «Gene Losses During Human Origins», PLoS Biol., 4, 3 (2006), e52.
Wedekind, C., Seebeck, T., Bettens, F., Paepke, A. J., «Mhc-Dependent Mate Preferences in Humans», Proc. Biol. Sci., 260, 1359 (1995), p. 245–249.
Wooding, S., Stone, A. C., Dunn, D. M., Mummidi, S., Jorde, L. B., Weiss, R. K., Ahuja, S., Bamshad, M. J., «Contrasting Effects of Natural Selection on Human and Chimpanzee Cc Chemokine Receptor 5», Am. J. Hum. Genet., 76, 2 (2005), p. 291–301.
Xue, Y., Daly, A., Yngvadottir, B., Liu, M., Coop, G., Kim, Y., Sabeti, P., et al., «Spread of an Inactive Form of Caspase-12 in Humans Is Due to Recent Positive Selection», Am. J. Hum. Genet., 78, 4 (2006), p. 659–670.
Zhernakova, A., Elbers, C. C., Ferwerda, B., Romanos, J., Trynka, G., Dubois, P. C., de Kovel, C. G., et al., «Evolutionary and Functional Analysis of Celiac Risk Loci Reveals Sh2b3 as a Protective Factor against Bacterial Infection», Am. J. Hum. Genet., 86, 6 (2010), p. 970–977.
Часть V. Гибридизация, культура и медицина
Abi-Rached, L., Jobin, M. J., Kulkarni, S., McWhinnie, A., Dalva, K., Gragert, L., Babrzadeh, F., et al., «The Shaping of Modern Human Immune Systems by Multiregional Admixture with Archaic Humans», Science, 334, 6052 (2011), p. 89–94.
Adhikari, K., Chacon-Duque, J. C., Mendoza-Revilla, J., Fuentes-Guajardo, M., Ruiz-Linares, A., «The Genetic Diversity of the Americas», Annu. Rev. Genomics Hum. Genet., 18 (2017), p. 277–296.
Aime, C., Laval, G., Patin, E., Verdu, P., Segurel, L., Chaix, R., Hegay, T., et al., «Human Genetic Data Reveal Contrasting Demographic Patterns between Sedentary and Nomadic Populations That Predate the Emergence of Farming», Mol. Biol. Evol., 30, 12 (2013), p. 2629–2644.
Albert, F. W., Kruglyak, L., «The Role of Regulatory Variation in Complex Traits and Disease», Nat. Rev. Genet., 16, 4 (2015), p. 197–212.
Ammerman, A. J., Cavalli-Sforza, L. L., The Neolithic Transition and the Genetics of Populations in Europe, Princeton, Princeton University Press, 1984.
Bach, J. F., «The Effect of Infections on Susceptibility to Autoimmune and Allergic Diseases», N. Engl. J. Med., 347, 12 (2002), p. 911–920.
Bamshad, M. J., Watkins, W. S., Dixon, M. E., Jorde, L. B., Rao, B. B., Naidu, J. M., Prasad, B. V., Rasanayagam, A., Hammer, M. F., «Female Gene Flow Stratifies Hindu Castes», Nature, 395, 6703 (1998), p. 651–652.
Bastard, P., Rosen, L. B., Zhang, Q., Michailidis, E., Hoffmann, H. H., Zhang, Y., Dorgham, K., et al., «Autoantibodies against Type I Ifns in Patients with Life-Threatening COVID-19», Science, 370, 6515 (2020).
Bell, J. T., Pai, A. A., Pickrell, J. K., Gaffney, D. J., Pique-Regi, R., Degner, J. F., Gilad, Y., Pritchard, J. K., «DNA Methylation Patterns Associate with Genetic and Gene Expression Variation in Hapmap Cell Lines», Genome Biol, 12, 1 (2011), R10.
Bergman, Y., Cedar, H., «DNA Methylation Dynamics in Health and Disease», Nat. Struct. Mol. Biol., 20, 3 (2013), p. 274–281.
Bonder, M. J., Luijk, R., Zhernakova, D. V., Moed, M., Deelen, P., Vermaat, M., Van Iterson, M., et al., «Disease Variants Alter Transcription Factor Levels and Methylation of Their Binding Sites», Nat. Genet., 49, 1 (2017), p. 131–138.
Browning, S. R., Browning, B. L., Zhou, Y., Tucci, S., Akey, J. M., «Analysis of Human Sequence Data Reveals Two Pulses of Archaic Denisovan Admixture», Cell, 173, 1 (2018), p. 53–61, e9.
Bryc, K., Auton, A., Nelson, M. R., Oksenberg, J. R., Hauser, S. L., Williams, S., Froment, A., et al., «Genome-Wide Patterns of Population Structure and Admixture in West Africans and African Americans», Proc. Natl Acad. Sci. USA, 107, 2 (2010), p. 786–791.
Busby, G. B., Band, G., Si Le, Q., Jallow, M., Bougama, E., Mangano, V. D., Amenga-Etego, L. N., et al., «Admixture into and within Sub-Saharan Africa», Elife, 5 (2016).
Buzbas, E. O., Verdu, P., «Inference on Admixture Fractions in a Mechanistic Model of Recurrent Admixture», Theor. Popul. Biol., 122 (2018), p. 149–157.
Carja, O., MacIsaac, J. L., Mah, S. M., Henn, B. M., Kobor, M. S., Feldman, M. W., Fraser, H. B., «Worldwide Patterns of Human Epigenetic Variation», Nat. Ecol. Evol., 1, 10 (2017), p. 1577–1583.
Cavalli, G., Heard, E., «Advances in Epigenetics Link Genetics to the Environment and Disease», Nature, 571, 7766 (2019), p. 489–499.
Cavalli-Sforza, L. L., Menozzi, P., Piazza, A., The History and Geography of Human Genes, Princeton, Princeton University Press, 1994.
Chacon-Duque, J. C., Adhikari, K., Avendano, E., Campo, O., Ramirez, R., Rojas, W., Ruiz-Linares, A., Restrepo, B. N., Bedoya, G., «African Genetic Ancestry Is Associated with a Protective Effect on Dengue Severity in Colombian Populations», Infect. Genet. Evol., 27 (2014), p. 89–95.
Chaix, R., Austerlitz, F., Khegay, T., Jacquesson, S., Hammer, M. F., Heyer, E., Quintana-Murci, L., «The Genetic or Mythical Ancestry of Descent Groups: Lessons from the Y Chromosome», Am. J. Hum. Genet., 75, 6 (2004), p. 1113–1116.
Chen, L., Ge, B., Casale, F. P., Vasquez, L., Kwan, T., Garrido-Martin, D., Watt, S., et al., «Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells», Cell, 167, 5 (2016), p. 1398–1414, e24.
Choin, J., Mendoza-Revilla, J., Arauna, L. R., Cuadros-Espinoza, S., Cassar, O., Larena, M., Ko, A. M., et al., «Genomic Insights into Population History and Biological Adaptation in Oceania», Nature, 592, 7855 (2021), p. 583–589.
Dannemann, M., Andres, A. M., Kelso, J., «Introgression of Neandertal- and Denisovan-Like Haplotypes Contributes to Adaptive Variation in Human Toll-Like Receptors», Am. J. Hum. Genet., 98, 1 (2016), p. 22–33.
Dannemann, M., Kelso, J., «The Contribution of Neanderthals to Phenotypic Variation in Modern Humans», Am. J. Hum. Genet., 101, 4 (2017), p. 578–589.
Dannemann, M., Prufer, K., Kelso, J., «Functional Implications of Neandertal Introgression in Modern Humans», Genome Biol., 18, 1 (2017), p. 61.
Dannemann, M., Racimo, F., «Something Old, Something Borrowed: Admixture and Adaptation in Human Evolution», Curr. Opin. Genet. Dev., 53 (2018), p. 1–8.
Dermitzakis, E. T., «Cellular Genomics for
